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原著論文 

2023年

Direct neuronal conversion of microglia/macrophages reinstates neurological function after stroke

Takashi Irie, Taito Matsuda ,Yoshinori Hayashi and Kinichi Nakashima

PNAS.,2023;vol.120, No.42 プレリリース

Reduced neuroinflammation via astrocytes and neutrophils promotes regeneration after spinal cord injury in neonatal mice

Kazuki Kitade, Kazu Kobayakawa, Hirokazu Saiwai, Yoshihiro Matsumoto, Kenichi Kawaguchi, Keiichiro Iida, Ken Kijima, Hirotaka Iura, Tetsuya Tamaru, Yohei Haruta, Gentaro Ono, Daijiro Konno, Takeshi Maeda, Seiji Okada, Kinichi Nakashima, Yasuharu Nakashima

J Neurotrauma.,2023;vol.0,No.ja

C4orf47 contributes to the dormancy of pancreatic cancer under hypoxic conditions

Shinjiro Nagao, Hideya Onishi, Makoto Kawamoto, Shogo Masuda, Lin Na, Shinji Morisaki, Naoya Iwamoto, Yutaka Yamada, Satoko Koga, Shu Ichimiya, Kazunori Nakayama, Akira Imaizumi, Kinichi Nakashima, Yoshinao Oda, Masafumi Nakamura

J Cancer.,2023;14(2):306-317

Lineage tracing identifies in vitro microglia-to-neuron conversion by NeuroD1 expression

Takashi Irie*, Kanae Matsuda-Ito*, Taito Matsuda#, Takahiro Masuda, Marco Prinz, Noriko Isobe, Kinichi Nakashima

Genes Cells.,2023;1-9

 

2022年

Expression level of the reprogramming factor NeuroD1 is critical for neuronal conversion efficiency from different cell types

Kanae Matsuda-Ito*, Taito Matsuda*#, and Kinichi Nakashima#

Scientific Reports.2022;12:17980

2021年

Growth factors with valproic acid restore injury-impaired hearing by promoting neuronal regeneration

Takahiro Wakizono, Hideyuki Nakashima, Tetsuro Yasui, Teppei Noda, Kei Aoyagi, Kanako Okada, Yasuhiro Yamada, Takashi Nakagawa, and Kinichi Nakashima

JCI Insight. 2021;6(22):e139171., 2021  プレスリリース 

SoxE group transcription factor Sox8 promotes astrocytic differentiation of neural stem/precursor cells downstream of Nfia

Jun Takouda, Sayako Katada, Takuya Imamura, Tsukasa Sanosaka, Kinichi Nakashima

Pharmacol. Res. Perspect., 9(6):e00749., 2021

Neural stem/precursor cells dynamically change their epigenetic landscape to differentially respond to BMP signaling for fate switching during brain development

Sayako Katada, Jun Takouda, Takumi Nakagawa, Mizuki Honda, Katsuhide Igarashi, Takuya Imamura, Yasuyuki Ohkawa, Shoko Sato, Hitoshi Kurumizaka, and Kinichi Nakashima

Genes Dev.,35(21-22):1431-1444., 2021  プレスリリース 

2021年11月号のCover Article に選ばれました。

Neuronal activation modulates enhancer activity of genes for excitatory synaptogenesis through de novo DNA methylation

Tomonori KAMEDA, Hideyuki NAKASHIMA, Takumi TAKIZAWA, Fumihito MIURA, Takashi ITO, Kinichi NAKASHIMA, Takuya IMAMURA

J Reprod Dev., 2021, 67(6):369-379

Early-life midazolam exposure persistently changes chromatin accessibility to impair adult hippocampal neurogenesis and cognition

Hiroyoshi Doi*, Taito Matsuda*#, Atsuhiko Sakai, Shuzo Matsubara, Sumio Hoka, Ken Yamaura, and Kinichi Nakashima#

Proc Natl Acad Sci USA, 118(38):e2107596118., 2021  プレスリリース

scRNA sequencing uncovers a TCF4-dependent transcription factor network regulating commissure development in mouse

Marie-Theres Wittmann, Sayako Katada, Elisabeth Sock, Philipp Kirchner, Arif B Ekici, Michael Wegner, Kinichi Nakashima, Dieter Chichung Lie, André Reis

Development, 15;148(14):dev196022, 2021

Transnasal transplantation of human induced pluripotent stem cell-derived microglia to the brain of immunocompetent mice

Bijay Parajuli, Hiroki Saito, Youichi Shinozaki, Eiji Shigetomi, Hiroto Miwa, Sosuke Yoneda, Miki Tanimura, Shigeki Omachi, Toshiyuki Asaki, Koji Takahashi, Masahide Fujita, Kinichi Nakashima, Schuichi Koizumi

Glia, 69(10), 2332-2348, 2021 プレスリリース

Generation of ovarian follicles from mouse pluripotent stem cells

Takashi Yoshino1, Takahiro Suzuki, Go Nagamatsu, Haruka Yabukami, Mika Ikegaya, Mami Kishima, Haruka Kita, Takuya Imamura, Kinichi Nakashima, Ryuichi Nishinakamura, Makoto Tachibana, Miki Inoue, Yuichi Shima, Ken-ichirou Morohashi, Katsuhiko Hayashi

Science, 373, 298, 2021

CADM1 and CADM2 Trigger Neuropathogenic Measles Virus-Mediated Membrane Fusion by Acting in cis

Yuta Shirogane, Ryuichi Takemoto, Tateki Suzuki, Tomonori Kameda, Kinichi Nakashima, Takao Hashiguchi, and Yusuke Yanagi

J Virol, 24;95(14):e0052821, 2021

MeCP2 controls neural stem cell fate specification through miR-199a-mediated inhibition of BMP–Smad signaling

Hideyuki Nakashima, Keita Tsujimura, Koichiro Irie, Takuya Imamura, Cleber A. Trujillo, Masataka Ishizu, Masahiro Uesaka, Miao Pan, Hirofumi Noguchi, Kanako Okada, Kei Aoyagi, Tomoko Andoh-Noda, Hideyuki Okano, Alysson R. Muotri, Kinichi Nakashima

Cell Reports, 35, 109124, 2021 プレスリリース¹プレスリリース² プレスリリース³

Combinatrial treatment of anti-High Mobility Group Box-1 monoclonal antibody and epothilone B improves functional recovery after spinal cord contusion injury

Yicheng Zhu, Naohiro Uezono, Tetsuro Yasui, Masahide Nakajo, Tatsuya Nagai, Dengli Wang, Masahiro Nishibori, KinichiNakashima

Neurosci Res, 172, 17-25, 2021

Reconstitution of the oocyte transcriptional network with transcription factors

Nobuhiko Hamazaki, Hirohisa Kyogoku, Hiromitsu Araki, Fumihito Miura, Chisako Horikawa, Norio Hamada, So Shimamoto, Orie Hikabe, Kinichi Nakashima, Tomoya S. Kitajima, Takashi Ito, Harry G. Leitch & Katsuhiko Hayashi

Nature, 589(7841):264-269, 2021

2020年

NFκB and TGFβ contribute to the expression of PTPN3 in activated human lymphocytes

Kazunori Nakayama, Hideya Onishi, Akiko Fujimura, Akira Imaizumi, Makoto Kawamoto, Yasuhiro Oyama, Shu Ichimiya, Satoko Koga, Yuichi Fujimoto, Kinichi Nakashima, Masafumi Nakamura

Cell Immunol, 358:104237, 2020

Identification of Qk as a glial precursor cell marker that governs the fate specification of neural stem cells to a glial cell lineage.

Takeuchi A., Takahashi Y., Iida K., Hosokawa M., Irie K., Ito M., Brown BJ., Ohno K., Nakashima K. & Hagiwara M.

Stem Cell Rep,15(4):883-897

Modeling of early neural development in vitro by direct neurosphere formation culture of chimpanzee induced pluripotent stem cells.

Kitajima R., Nakai R., Imamura T., Kameda T., Kozuka D., Hirai H., Ito H., Imai H., Imamura M.

Stem Cell Rep, 44: 101749, 2020

Enhanced processivity of Dnmt1 by monoubiquitinated Histone H3.

Mishima Y.,Brueckner L., Takahashi S., Kawakami T., Otani J., Shinohara A., Takeshita K.,Garvilles RG., Watanabe M., Sakai N., Takeshima H., Nachtegael C., Nishiyama A.,Nakanishi M., Arita K., Nakashima K., Hojo H., Suetake I.

Genes Cells, 25: 22-32, 2020

2019年

Early-life exposure to low levels of permethrin exerts impairments in learning and memory with the effects on neuronal and glial population in adult male mice.

Saito H., Hara K., Tominaga T., Nakashima K. & Tanemura K.

J Appl Toxicol, 39:1651-1662, 2019

Suppressor of fused controls perinatal expansion and quiescence of future dentate adult neural stem cells.

Noguchi H., Castillo J.G., Nakashima K. & Pleasure S.J.

eLIFE, 8:e42918, 2019

Pioneer factor NeuroD1 rearranges transcriptional and epigenetic profiles to execute microglia-neuron conversion.

#Matsuda T.,Irie T.,Katsurabayashi S.,Hayashi T.,Nagai T.,Hamazaki N.,Adefuin AM.,Miura F.,Ito T.,Kimura H.,Shirahige K.,Takeda T.,Iwasaki K.,Imamura T. & #Nakashima K.

Neuron, 101, 472-485, 2019

Nox4 promotes neural stem/precursor cell proliferation and neurogenesis in the hippocampus and restores memory function following trimethyltin-induced Injury.

Yoshikawa Y.,*Ago T.,Kuroda J.,Wakisaka Y.,Tachibana M.,Komori M.,Shibahara T.,Nakashima H.,Nakashima K. & Kitazono T.

Neuroscience, 398, 193-205, 2019

 2018年

Canonical TGF-β signaling negatively regulates neuronal morphogenesis through TGIF/Smad complex-mediated CRMP2 suppression

Nakashima H., Tsujimura K.*, Irie K., Ishizu M., Pan M., Kameda T. & Nakashima K.*

J Neurosci, 38: 4791-4810, 2018

Np95/Uhrf1 regulates tumor suppressor gene expression of neural stem/precursor cells, contributing to neurogenesis in the adult mouse brain

Murao N., Matsubara S., Matsuda T., Noguchi H., Mutoh T., Mutoh M., Koseki H., Namihira M. & Nakashima K.*

Neurosci ResEpub ahead of print, May 31, 2018

Ectopic neurogenesis induced by prenatal antiepileptic drug exposure augments seizure susceptibility in adult mice

Sakai A., Matsuda T., Doi H., Nagaishi Y., Kato K. & Nakashima K.*

Proc Natl Acad Sci USAEpub ahead of print, Apr 2, 2018 プレスリリースはこちら

 

Therapeutic time window of anti-high mobility group box-1 antibody administration in mouse model of spinal cord injury

Nakajo M., Uezono N., Nakashima H., Wake H., Komiya S., Nishibori M. & Nakashima K.*

Neurosci Res, Epub ahead of print, Mar 28, 2018 

Prior treatment with anti-High Mobility Group Box-1 antibody boosts human neural stem cell transplantation-mediated functional recovery after spinal cord injury

Uezono N., Zhu Y., Fujimoto Y., Yasui T., Matsuda T., Nakajo M., Abematsu M., Setoguchi T., Mori S., Takahashi H.K., Komiya S., Nishibori M. & Nakashima K.*

Stem Cells, 36, 737-750, 2018 プレスリリースはこちら

 

HMGB2 expression is associated with transition from a quiescent to an activated state of adult neural stem cells

Kimura A., Matsuda T.*, Sakai A., Murao N. & Nakashima K.* (*Corresponding authors)

Dev Dyn, 247, 229-238, 2018

 2017年

Synergistic induction of astrocytic differentiation by factors secreted from meninges in the mouse developing brain

Kawamura Y., Katada S., Noguchi H., Yamamoto H., Sanosaka T., Iihara K. & Nakashima K.*

FEBS Lett, 591, 3709-3720

DNA methylome analysis identifies transcription factor-based epigenomic signatures of multilineage competence in neural stem/progenitor cells

Sanosaka T.◊*, Imamura T.◊*, Hamazaki N., Chai M.C., Igarashi K., Ideta-Otsuka M., Miura F., Ito T., Fujii N., Ikeo K. & Nakashima K.* (Co-first authors, *Co-corresponding authors)

Cell Reports, 20, 2992–3003, 2017 プレスリリースはこちら

 

PRMT1 regulates astrocytic differentiation of embryonic neural stem/precursor cells

Honda M., Nakashima K. & Katada S.*

J Neurochem, 142, 901-907, 2017

Hypoxia epigenetically confers astrocytic differentiation potential on human pluripotent cell-derived neural precursor cells

Yasui T., Uezono N., Nakashima H, Noguchi H., Matsuda T., Noda-Andoh T., Okano H. & Nakashima K.*

Stem Cell Reports, 8, 1743–1756, 2017 プレスリリースはこちら

NEUROD1 instructs neuronal conversion in non-reactive astrocytes

Brulet R., Matsuda T., Zhang L., Miranda C., Giacca M., Kaspar B.K., Nakashima K. & Hsieh J.*

Stem Cell Reports, 8, 1506–1515, 2017

Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

Uesaka M., Agata K., Oishi T., Nakashima K. & Imamura T.*

BMC Genomics, 18, 285, 2017

2016年

Prenatal deletion of DNA methyltransferase 1 in neural stem cells impairs neurogenesis and causes anxiety-like behavior in adulthood

Noguchi H., Kimura A., Murao N., Namihira M. & Nakashima K.*

Neurogenesis, 3, 2016

Targeted DNA demethylation in vivo using dCas9–peptide repeat and scFv–tet1 catalytic domain fusions

Morita S., Noguchi H., Horii T., Nakabayashi K., Kimura M., Okamura K., Sakai A., Nakashima H., Hata K., Nakashima K. & Hatada I.*

Nat Biotechnol, 34, 1060–1065, 2016

MicroRNA-214 promotes dendritic development by targeting the schizophrenia-associated gene Quaking (Qki)

Irie K., Tsujimura K.*, Nakashima H. & Nakashima K.* (*Corresponding authors)

J Biol Chem, 291, 13891–13904, 2016

1 June 2016; 36 (22)

DNA methyltransferase 1 is indispensable for development of the hippocampal dentate gyrus

Noguchi H., Murao N., Kimura A., Matsuda T., Namihira M. & Nakashima K.*

J Neurosci, 36, 6050–6068, 2016

Cover Article に選ばれました。

Identification of genes associated with the astrocyte-specific gene Gfap during astrocyte differentiation

Ito K., Sanosaka T., Igarashi K., Otsuka I.M., Aizawa A., Uosaki Y., Noguchi A., Arakawa H., Nakashima K. & Takizawa T.*

Sci Rep, 6, 23903, 2016

Bidirectional promoters link cAMP signaling with irreversible differentiation through promoter-associated non-coding RNA (pancRNA) expression in PC12 cells

Yamamoto N., Agata K., Nakashima K. & Imamura T.*

Nucleic Acids Res, 44, 5105-5122, 2016  プレスリリースはこちら と こちら

2015年

Reduced adult hippocampal neurogenesis and cognitive impairments following prenatal treatment of the antiepileptic drug valproic acid

Juliandi B.◊, Tanemura K.◊, Igarashi K., Tominaga T., Furukawa Y., Otsuka M., Moriyama N., Ikegami D., Abematsu M., Sanosaka T., Tsujimura K., Narita M., Kanno J. & Nakashima K.* (Co-first authors)

Stem Cell Reports, 5, 1-14, 2015 プレスリリースはこちら

miR-199a links MeCP2 with mTOR signaling and its dysregulation leads to Rett Syndrome phenotypes

Tsujimura K., Irie K., Nakashima H., Egashira Y., Fukao Y., Fujiwara M., Itoh M., Uesaka M., Imamura T., Nakahata Y., Yamashita Y., Abe T., Takamori S. & Nakashima K.*

Cell Rep, 12, 1-15, 2015 プレスリリースはこちら

Recommended by Faculty of 1000

Low-cost three-dimensional gait analysis system for mice with an infrared depth sensor

Nakamura A., Funaya H., Uezono N., Nakashima K., Ishida Y., Suzuki T., Wakana S. & Shibata T.*

Neurosci Res, 100, 55-62, 2015

Differentiation of multipotent neural stem cells derived from Rett syndrome patients is biased toward the astrocytic lineage

Andoh-Noda T., Akamatsu W., Miyake K., Matsumoto T., Yamaguchi R., Sanosaka T., Okada Y., Kobayashi T., Ohyama M., Nakashima K., Kurosawa H., Kubota T. & Okano H.*

Mol Brain, 8, 2015

TLR9 signalling in microglia attenuates seizure-induced aberrant neurogenesis in the adult hippocampus

Matsuda T., Murao N., Katano Y., Juliandi B., Kohyama J., Akira S., Kawai T. & Nakashima K.*

Nat commun, 6, 6514, 2015 プレスリリースはこちら

Recommended by Faculty of 1000

Expression of DNMT1 in neural stem/precursor cells is critical for survival of newly generated neurons in the adult hippocampus

Noguchi H., Kimura A., Murao N., Matsuda T., Namihira M. & Nakashima K.*

Neurosci Res, 95, 1-11, 2015

Gene activation-associated long noncoding RNAs function in mouse preimplantation development

Hamazaki N., Uesaka M., Nakashima K., Agata K. & Imamura T.*

Development, 142, 910-920, 2015 プレスリリースはこちら

2014年

Characterization of Np95 expression in mouse brain from embryo to adult: A novel marker for proliferating neural stem/precursor cells

Murao N., Matsuda T., Noguchi H., Koseki H., Namihira M*. & Nakashima K*. (*Co-corresponding authors)

Neurogenesis, 1, 1-11, 2014

VPA alleviates neurological deficits and restores gene expression in a mouse model of Rett syndrome

Guo W., Tsujimura K., Otsuka I.M., Irie K., Igarashi K*., Nakashima K*. & Zhao X*. (Co-first authors, *Co-corresponding authors)

PLoS ONE, 9, e100215, 2014

Foxa2 acts as a co-activator potentiating expression of the Nurr1-induced DA phenotype via epigenetic regulation

Yi S.H., He X.B., Rhee Y.H., Park C.H., Takizawa T., Nakashima K. & Lee S.H.*

Development, 141, 761-772, 2014

Bidirectional promoters are the major source of gene activation-associated non-coding RNAs in mammals

Uesaka M., Nishimura O., Go Y., Nakashima K., Agata K. & Imamura T.*

BMC Genomics, 1535, 2014

2013年

Prenatal exposure to suberoylanilide hydroxamic acid perturbs corticogenesis

Yuniarti N., Juliandi B., Muhchyi C., Noguchi H., Sanosaka T. & Nakashima K.

Neurosci Res, 77, 42-49, 2013

Chromatin accessibility at a STAT3 target site is altered prior to astrocyte differentiation

Urayama S., Semi K., Sanosaka T., Hori Y., Namihira M., Kohyama J., Takizawa T. & Nakashima K.

Cell Struct Func, 38, 55-66, 2013

2012年

Unfolded protein response activated by OASIS family transcription factors promotes astrocyte differentiation

Saito A., Kanemoto S., Kawasaki N., Asada R., Iwamoto H., Oki M., Miyagi H., Izumi S., Sanosaka T., Nakashima K. & Imaizumi K.

Nat Commun, 3, 967, 2012

Treatment of a mouse model of spinal cord injury by transplantation of human iPS cell-derived long-term self-renewing neuroepithelial-like stem cells

Fujimoto Y., Abematsu M., Falk A., Tsujimura K., Sanosaka T., Juliandi B., Semi K., Namihira M., Komiya S., Smith A., & Nakashima K.

Stem Cells, 30, 1163-1173, 2012

Oxygen Levels Epigenetically Regulate Fate Switching of Neural Precursor Cells via Hypoxia-Inducible Factor 1alpha-Notch Signal Interaction in the Developing Brain

Mutoh T., Sanosaka T., Ito K. & Nakashima K.

Stem Cells, 30, 561-569, 2012.

Induction of superficial cortical layer neurons from mouse embryonic stem cells by valproic acid

Juliandi B., Abematsu M., Sanosaka T., Tsujimura K., Smith A. & Nakashima K.

Neurosci Res, 72, 23-31, 2012

2011年

Insulin biosynthesis in neuronal progenitors derived from adult hippocampus and the olfactory bulb

Kuwabara T., Kagalwala M.N., Onuma Y., Ito Y., Warashina M., Terashima K., Sanosaka T., Nakashima K., Gage F.H. & Asashima M.

EMBO Mol Med, 3, 742-754, 2011

Role of GLI2 in the growth of human osteosarcoma

Nagao H., Ijiri K., Hirotsu M., Ishidou Y., Yamamoto T., Nagano S., Takizawa T., Nakashima K., Komiya S. & Setoguchi T.

J Pathol, 224, 169-179, 2011

2010年

Neurons derived from transplanted neural stem cells restore disrupted neuronal circuitry in a mouse model of spinal cord injury

Abematsu M., Tsujimura K., Yamano M., Saito M., Kohno K., Kohyama J., Namihira M., Komiya S. & Nakashima K.

J Clin Invest, 120, 3255-3266, 2010

BMP-induced REST regulates the establishment and maintenance of astrocytic identity

Kohyama J., Sanosaka T., Tokunaga A., Takatsuka E., Tsujimura K., Okano H. & Nakashima K.

J Cell Biol, 189, 159-170, 2010

Signaling through BMPR-IA regulates quiescence and long-term activity of neural stem cells in the adult hippocampus

Mira H., Andreu Z., Suh H., Lie D.C., Jessberger S., Consiglio A., San Emeterio J., Hortiguela R., Marques-Torrejon M.A., Nakashima K., Colak D., Gotz M., Farinas I. & Gage F.H.

Cell Stem Cell, 7, 78-89, 2010

L1 retrotransposition in neurons is modulated by MeCP2

Muotri A.R., Marchetto M.C., Coufal N.G., Oefner R., Yeo G., Nakashima K. & Gage F.H.

Nature, 468, 443-446, 2010

2009年

Astrocyte Differentiation of Neural Precursor Cells is Enhanced by Retinoic Acid Through a Change in Epigenetic Modification

Asano H., Aonuma M., Sanosaka T., Kohyama J., Namihira M. & Nakashima K.

Stem Cells, 27, 2744-2752, 2009

Wnt-mediated activation of NeuroD1 and retro-elements during adult neurogenesis

Kuwabara T., Hsieh J., Muotri A., Yeo G., Warashina M., Lie D.C., Moore L., Nakashima K.,  Asashima M. & Gage F.H.

Nat Neurosci, 12, 1097-1105, 2009

Committed Neuronal Precursors Confer Astrocytic Potential on Residual Neural Precursor Cells

  Namihira M., Kohyama J., Semi K., Sanosaka T., Deneen B., Taga T. & Nakashima K.

  Dev Cell, 16, 245-255, 2009

Periventricular notch activation and asymmetric Ngn2 and Tbr2 expression in pair-generated neocortical daughter cells

  Ochiai W., Nakatani S., Takahara T., Kainuma M., Masaoka M., Minobe S., Namihira M., Nakashima K., Sakakibara A., Ogawa M. & Miyata T.

  Mol Cell Neurosci, 40, 225-233, 2009

Neuronal differentiation of neural precursor cells is promoted by the methyl-CpG-binding protein MeCP2

  Tsujimura K., Abematsu M., Kohyama J., Namihira M. & Nakashima K.

  Exp Neurol, 219, 104-111, 2009

2008年

Astrocyte-specific genes are generally demethylated in neural precursor cells prior to astrocytic differentiation

  Hatada I., Namihira M., Morita S., Kimura M., Horii T. & Nakashima K.

  PLoS ONE. 3, e3189, 2008

Epigenetic regulation of neural cell differentiation plasticity in the adult mammalian brain

  Kohyama J., Kojima T., Takatsuka E., Yamashita T., Namiki J., Hsieh J., Gage F.H., Namihira M., Okano H., Sawamoto K. & Nakashima K.

  Proc Natl Acad Sci USA, 105, 18012-18017, 2008

Nuclear receptor TLX regulates cell cycle progression in neural stem cells of the developing brain

  Li W., Sun G., Yang S., Qu Q., Nakashima K. & Shi Y.

  Mol Endocrinol, 22, 56-64, 2008

Identification of genes that restrict astrocyte differentiation of midgestational neural precursor cells

  Sanosaka T., Namihira M., Asano H., Kohyama J., Aisaki K., Igarashi K., Kanno J. & Nakashima K.

  Neuroscience, 155, 780-788, 2008

2007年

Bcl-XL/Bax Proteins Direct the Fate of Embryonic Cortical Precursor Cells

  Chang M.Y., Sun W., Ochiai W., Nakashima K., Kim S.Y., Park C.H., Kang J.S., Shim J.W., Jo A.Y., Kang C.S., Lee Y.S., Kim J.S. & Lee S.H.

  Mol Cell Biol, 27, 4293-4305, 2007

Potentiation of astrogliogenesis by STAT3-mediated activation of bone morphogenetic protein-Smad signaling in neural stem cells

  Fukuda S., Abematsu M., Mori H., Yanagisawa M., Kagawa T., Nakashima K., Yoshimura A. & Taga T.

  Mol Cell Biol, 27, 4931-4937, 2007

Epigenetic modulation of seizure-induced neurogenesis and cognitive decline

  Jessberger S., Nakashima K., Clemenson G.D., Jr., Mejia E., Mathews E., Ure K., Ogawa S., Sinton C.M., Gage F.H. & Hsieh J.

  J Neurosci, 27, 5967-5975, 2007

2006年

Identification of astrocyte-expressed factors that modulate neural stem/progenitor cell differentiation

  Barkho B.Z., Song H., Aimone J.B., Smrt R.D., Kuwabara T., Nakashima K., Gage F.H. & Zhao X.

  Stem Cells Dev, 15, 407-421, 2006

Conversion of mammalian Muller glial cells into a neuronal lineage by in vitro aggregate-culture

  Kubota A., Nishida K., Nakashima K. & Tano Y.

  Biochem Biophys Res Commun, 351, 514-520, 2006

Neuropoietin induces neuroepithelial cells to differentiate into astrocytes via activation of STAT3

  Ohno M., Kohyama J., Namihira M., Sanosaka T., Takahashi J.A., Hashimoto N. & Nakashima K.

  Cytokine, 36, 17-22, 2006

Methyl-CpG binding proteins are involved in restricting differentiation plasticity in neurons

  Setoguchi H., Namihira M., Kohyama J., Asano H., Sanosaka T. & Nakashima K.

  J Neurosci Res, 84, 969-979, 2006

Maintenance of embryonic stem cell pluripotency by Nanog-mediated reversal of mesoderm specification

  Suzuki A., Raya A., Kawakami Y., Morita M., Matsui T., Nakashima K., Gage F.H., Rodriguez-Esteban C. & Belmonte J.C.

  Nat Clin Pract Cardiovasc Med, 3 Suppl 1, S114-S122, 2006

Nanog binds to Smad1 and blocks bone morphogenetic protein-induced differentiation of embryonic stem cells

  Suzuki A., Raya A., Kawakami Y., Morita M., Matsui T., Nakashima K., Gage F.H., Rodriguez-Esteban C. & Izpisua Belmonte J.C.

  Proc Natl Acad Sci USA, 103, 10294-10299, 2006

2005年

Development of functional human embryonic stem cell-derived neurons in mouse brain

  Muotri A.R., Nakashima K., Toni N., Sandler V.M. & Gage F.H.

  Proc Natl Acad Sci USA, 102, 18644-18648, 2005

Stage- and site-specific DNA demethylation during neural cell development from embryonic stem cells

  Shimozaki K., Namihira M., Nakashima K. & Taga T.

  J Neurochem, 93, 432-439, 2005

Fate redirection of hippocampal astrocytes toward neuronal lineage by aggregate culture.

  Yanagisawa M., Nakashima K., Ochiai W., Takizawa T., Setoguchi T., Uemura A., Takizawa M., Nobuhisa I. & Taga T.

  Neurosci Res, 53, 176-182, 2005

2004年

IGF-I instructs multipotent adult neural progenitor cells to become oligodendrocytes

  Hsieh J., Aimone J.B., Kaspar B.K., Kuwabara T., Nakashima K. & Gage F.H.

  J Cell Biol, 164, 111-122, 2004

Histone deacetylase inhibition-mediated neuronal differentiation of multipotent adult neural progenitor cells

  Hsieh J., Nakashima K., Kuwabara T., Mejia E. & Gage F.H.

  Proc Natl Acad Sci USA, 101, 16659-16664, 2004

A small modulatory dsRNA specifies the fate of adult neural stem cells

  Kuwabara T., Hsieh J., Nakashima K., Taira K. & Gage F.H.

  Cell, 116, 779-793, 2004

Developmental stage dependent regulation of DNA methylation and chromatin modification in a immature astrocyte specific gene promoter

  Namihira M., Nakashima K. & Taga T.

  FEBS Lett, 572, 184-188, 2004

Treatment of spinal cord injury by transplantation of fetal neural precursor cells engineered to express BMP inhibitor

  Setoguchi T., Nakashima K., Takizawa T., Yanagisawa M., Ochiai W., Okabe M., Yone K., Komiya S. & Taga T.

  Exp Neurol, 189, 33-44, 2004

Expression and function of orphan nuclear receptor TLX in adult neural stem cells

  Shi Y., Chichung Lie D., Taupin P., Nakashima K., Ray J., Yu R.T., Gage F.H. & Evans R.M.

  Nature, 427, 78-83, 2004

Cell fusion-independent differentiation of neural stem cells to the endothelial lineage

  Wurmser A.E., Nakashima K., Summers R.G., Toni N., D’Amour K.A., Lie D.C. & Gage F.H.

  Nature, 430, 350-356, 2004

2003年

Interisland evolution of Trimeresurus flavoviridis venom phospholipase A2 isozymes

  Chijiwa T., Yamaguchi Y., Ogawa T., Deshimaru M., Nobuhisa I., Nakashima K., Oda-Ueda N., Fukumaki Y., Hattori S. & Ohno M.

  J Mol Evol, 56, 286-293, 2003

Involvement of Oct3/4 in the enhancement of neuronal differentiation of ES cells in neurogenesis-inducing cultures

  Shimozaki K., Nakashima K., Niwa H. & Taga T.

  Development, 130, 2505-2512, 2003

Requirement of gp130 signaling for the AGM hematopoiesis

  Takizawa M., Nobuhisa I., Igarashi K., Ueno M., Nakashima K., Kitamura T. & Taga T.

  Exp Hematol, 31, 283-289, 2003

Enhanced gene activation by Notch and BMP signaling cross-talk

  Takizawa T., Ochiai W., Nakashima K. & Taga T.

  Nucleic Acids Res, 31, 5723-5731, 2003

Mice lacking methyl-CpG binding protein 1 have deficits in adult neurogenesis and hippocampal function

  Zhao X., Ueba T., Christie B.R., Barkho B., McConnell M.J., Nakashima K., Lein E.S., Eadie B.D., Willhoite A.R., Muotri A.R., Summers R.G., Chun J., Lee K.F. & Gage F.H.

  Proc Natl Acad Sci USA, 100, 6777-6782, 2003

2002年

The Role of gp130 in Cerebral Cortical Development: In Vivo Functional Analysis in a Mouse Exo Utero System

  Hatta T., Moriyama K., Nakashima K., Taga T. & Otani H.

  J Neurosci, 22, 5516-5524, 2002

Identification of a novel transcription factor, ELYS, expressed predominantly in mouse foetal haematopoietic tissues

  Kimura N., Takizawa M., Okita K., Natori O., Igarashi K., Ueno M., Nakashima K., Nobuhisa I. & Taga T.

  Genes Cells, 7, 435-446, 2002

Cardiotrophin-like cytokine induces astrocyte differentiation of fetal neuroepithelial cells via activation of stat3

  Uemura A., Takizawa T., Ochiai W., Yanagisawa M., Nakashima K. & Taga T.

  Cytokine, 18, 1-7, 2002

2001年

Ligand recognition by the vitamin D receptor.

  Choi M., Yamamoto K., Masuno H., Nakashima K., Taga T. & Yamada S.

  Bioorg Med Chem, 9, 1721-1730, 2001

Brain from bone: efficient “meta-differentiation” of marrow stroma-derived mature osteoblasts to neurons with Noggin or a demethylating agent

  Kohyama J., Abe H., Shimazaki T., Koizumi A., Nakashima K., Gojo S., Taga T., Okano H., Hata J. & Umezawa A.

  Differentiation, 68, 235-244, 2001

A new expression cloning strategy for isolation of substrate-specific kinases by using phosphorylation site-specific antibody

  Matsuo R., Ochiai W., Nakashima K. & Taga T.

  J Immunol Methods, 247, 141-151, 2001

BMP2-mediated alteration in the developmental pathway of fetal mouse brain cells from neurogenesis to astrocytogenesis

  Nakashima K., Takizawa T., Ochiai W., Yanagisawa M., Hisatsune T., Nakafuku M., Miyazono K., Kishimoto T., Kageyama R. & Taga T.

  Proc Natl Acad Sci USA, 98, 5868-5873, 2001

Astrocyte differentiation of fetal neuroepithelial cells involving cardiotrophin-1-induced activation of STAT3

  Ochiai W., Yanagisawa M., Takizawa T., Nakashima K. & Taga T.

  Cytokine, 14, 264-271, 2001

Traumatic injury-induced BMP7 expression in the adult rat spinal cord

  Setoguchi T., Yone K., Matsuoka E., Takenouchi H., Nakashima K., Sakou T., Komiya S. & Izumo S

  Brain Res, 921, 219-225, 2001.

DNA methylation is a critical cell-intrinsic determinant of astrocyte differentiation in the fetal brain

  Takizawa T., Nakashima K., Namihira M., Ochiai W., Uemura A., Yanagisawa M., Fujita N., Nakao M. & Taga T

  Dev Cell, 1, 749-758, 2001.

Directly linked soluble IL-6 receptor-IL-6 fusion protein induces astrocyte differentiation from neuroepithelial cells via activation of STAT3

  Takizawa T., Yanagisawa M., Ochiai W., Yasukawa K., Ishiguro T., Nakashima K. & Taga T.

  Cytokine, 13, 272-279, 2001

Endomucin is expressed in embryonic dorsal aorta and is able to inhibit cell adhesion

  Ueno M., Igarashi K., Kimura N., Okita K., Takizawa M., Nobuhisa I., Kojima T., Kitamura T., Samulowitz U., Vestweber D., Shimomura T., Suda T., Nakashima K. & Taga T.

  Biochem Biophys Res Commun, 287, 501-506, 2001

Inhibition of BMP2-induced, TAK1 kinase-mediated neurite outgrowth by Smad6 and Smad7

  Yanagisawa M., Nakashima K., Takeda K., Ochiai W., Takizawa T., Ueno M., Takizawa M., Shibuya H. & Taga T.

  Genes Cells, 6, 1091-1099, 2001

Signaling crosstalk underlying synergistic induction of astrocyte differentiation by BMPs and IL-6 family of cytokines

  Yanagisawa M., Nakashima K., Takizawa T., Ochiai W., Arakawa H. & Taga T.

  FEBS Lett, 489, 139-143, 2001

Fate alteration of neuroepithelial cells from neurogenesis to astrocytogenesis by bone morphogenetic proteins

  Yanagisawa M., Takizawa T., Ochiai W., Uemura A., Nakashima K. & Taga T.

  Neurosci Res, 41, 391-396, 2001

2000年

Regional evolution of venom-gland phospholipase A2 isoenzymes of Trimeresurus flavoviridis snakes in the southwestern islands of Japan

  Chijiwa T., Deshimaru M., Nobuhisa I., Nakai M., Ogawa T., Oda N., Nakashima K., Fukumaki Y., Shimohigashi Y., Hattori S. & Ohno M.

  Biochem J, 347, 491-499, 2000

Identification of a novel WD repeat-containing gene predominantly expressed in developing and regenerating neurons

  Kato H., Chen S., Kiyama H., Ikeda K., Kimura N., Nakashima K. & Taga T.

   J Biochem, 128, 923-932, 2000

BMP2-induced apoptosis is mediated by activation of the TAK1-p38 kinase pathway that is negatively regulated by Smad6

  Kimura N., Matsuo R., Shibuya H., Nakashima K. & Taga T.

  J Biol Chem, 275, 17647-17652, 2000

Cell density-dependent regulation of hepatic development by a gp130-independent pathway

  Kojima N., Kinoshita T., Kamiya A., Nakamura K., Nakashima K., Taga T., Miyajima A..

  Biochem Biophys Res Commun, 277, 152-158, 2000

Genomic organization, sequence and chromosomal localization of the mouse Tbr2 gene and a comparative study with Tbr1

  Ueno M., Kimura N., Nakashima K., Saito-Ohara F., Inazawa J. & Taga T.

  Gene, 254, 29-35, 2000

Three-dimensional modeling of and ligand docking to vitamin D receptor ligand binding domain

  Yamamoto K., Masuno H., Choi M., Nakashima K., Taga T., Ooizumi H., Umesono K., Sicinska W., VanHooke J., DeLuca H.F. & Yamada S.

  Proc Natl Acad Sci USA, 97, 1467-1472, 2000

Astrocyte differentiation of fetal neuroepithelial cells by interleukin-11 via activation of a common cytokine signal transducer, gp130, and a transcription factor, STAT3

  Yanagisawa M., Nakashima K., Arakawa H., Ikenaka K., Yoshida K., Kishimoto T., Hisatsune T. & Taga T.

  J Neurochem, 74, 1498-1504, 2000

1999年

Fetal liver development requires a paracrine action of oncostatin M through the gp130 signal transducer.

  Kamiya A., Kinoshita T., Ito Y., Matsui T., Morikawa Y., Senba E., Nakashima K., Taga T., Yoshida K., Kishimoto T. & Miyajima A.

  EMBO J, 18, 2127-2136, 1999

A novel mammalian T-box-containing gene, Tbr2, expressed in mouse developing brain

  Kimura N., Nakashima K., Ueno M., Kiyama H. & Taga T.

  Brain Res Dev Brain Res, 115, 183-193, 1999

A brain region-specific gene product Lhx6.1 interacts with Ldb1 through tandem LIM-domains

  Kimura N., Ueno M., Nakashima K. & Taga T.

  J Biochem, 126, 180-187, 1999

Synergistic signaling in fetal brain by STAT3-Smad1 complex bridged by p300

  Nakashima K., Yanagisawa M., Arakawa H., Kimura N., Hisatsune T., Kawabata M., Miyazono K. & Taga T.

  Science, 284, 479-482, 1999

Developmental requirement of gp130 signaling in neuronal survival and astrocyte differentiation

  Nakashima K., Wiese S., Yanagisawa M., Arakawa H., Kimura N., Hisatsune T., Yoshida K., Kishimoto T., Sendtner M. & Taga T.

  J Neurosci, 19, 5429-5434, 1999

Astrocyte differentiation mediated by LIF in cooperation with BMP2

  Nakashima K., Yanagisawa M., Arakawa H. & Taga T.

  FEBS Lett, 457, 43-46, 1999

STAT3-mediated astrocyte differentiation from mouse fetal neuroepithelial cells by mouse oncostatin M

  Yanagisawa M., Nakashima K. & Taga T.

  Neurosci Lett, 269, 169-172, 1999

1998年

Molecular cloning of mouse choline kinase and choline/ethanolamine kinase: their sequence comparison to the respective rat homologs

  Aoyama C., Nakashima K. & Ishidate K.

  Biochim Biophys Acta, 1393, 179-185, 1998

Complementary DNA sequence for a 42 kDa rat kidney choline/ethanolamine kinase

  Aoyama C., Nakashima K., Matsui M. & Ishidate K.

  Biochim Biophys Acta, 1390, 1-7, 1998

Retrotransposable CR1-like elements in crotalinae snake genomes

  Nobuhisa I., Ogawa T., Deshimaru M., Chijiwa T., Nakashima K.I., Chuman Y., Shimohigashi Y., Fukumaki Y., Hattori S. & Ohno M.

  Toxicon, 36, 915-920, 1998

1997年

Leptin receptor (OB-R) oligomerizes with itself but not with its closely related cytokine signal transducer gp130

  Nakashima K., Narazaki M. & Taga T.

  FEBS Lett, 403, 79-82, 1997

Overlapping and distinct signals through leptin receptor (OB-R) and a closely related cytokine signal transducer, gp130

  Nakashima K., Narazaki M. & Taga T.

  FEBS Lett, 401, 49-52, 1997

Structures of genes encoding phospholipase A2 inhibitors from the serum of Trimeresurus flavoviridis snake

  Nobuhisa I., Deshimaru M., Chijiwa T., Nakashima K., Ogawa T., Shimohigashi Y., Fukumaki Y., Hattori S., Kihara H. & Ohno M.

  Gene, 191, 31-37, 1997

1996年

Accelerated evolution of crotalinae snake venom gland serine proteases

  Deshimaru M., Ogawa T., Nakashima K., Nobuhisa I., Chijiwa T., Shimohigashi Y., Fukumaki Y., Niwa M., Yamashina I., Hattori S. & Ohno M.

  FEBS Lett, 397, 83-88, 1996

Roles of lysine-69 in dimerization and activity of Trimeresurus flavoviridis venom aspartate-49-phospholipase A2

  Nakamura S., Nakai M., Nakashima K., Ogawa T., Shimohigashi Y., Ohno M., Kihara H., Yamane T. & Ashida T.

  J Mol Recognit, 9, 23-30, 1996

Accelerated evolution of Trimeresurus okinavensis venom gland phospholipase A2 isozyme-encoding genes

  Nobuhisa I., Nakashima K., Deshimaru M., Ogawa T., Shimohigashi Y., Fukumaki Y., Sakaki Y., Hattori S., Kihara H. & Ohno M.

  Gene, 172, 267-272, 1996

Accelerated evolution of snake venom phospholipase A2 isozymes for acquisition of diverse physiological functions

  Ogawa T., Nakashima K., Nobuhisa I., Deshimaru M., Shimohigashi Y., Fukumaki Y., Sakaki Y., Hattori S. & Ohno M.

  Toxicon, 34, 1229-1236, 1996

1995年

Purification and primary structure of a myotoxic lysine-49 phospholipase A2 with low lipolytic activity from Trimeresurus gramineus venom

  Nakai M., Nakashima K.I., Ogawa T., Shimohigashi Y., Hattori S., Chang C.C. & Ohno M.

  Toxicon, 33, 1469-1478, 1995

Accelerated evolution in the protein-coding regions is universal in crotalinae snake venom gland phospholipase A2 isozyme genes

  Nakashima K., Nobuhisa I., Deshimaru M., Nakai M., Ogawa T., Shimohigashi Y., Fukumaki Y., Hattori M., Sakaki Y., Hattori S. & Ohno M.

  Proc Natl Acad Sci USA, 92, 5605-5609, 1995

Structures of genes encoding TATA box-binding proteins from Trimeresurus gramineus and T. flavoviridis snakes

  Nakashima K., Nobuhisa I., Deshimaru M., Ogawa T., Shimohigashi Y., Fukumaki Y., Hattori M., Sakaki Y., Hattori S. & Ohno M.

  Gene, 152, 209-213, 1995

Molecular evolution of group II phospholipases A2

  Ogawa T., Kitajima M., Nakashima K., Sakaki Y. & Ohno M.

  J Mol Evol, 41, 867-877, 1995

Trimeresurus flavoviridis venom gland phospholipase A2 isozymes genes have evolved via accelerated substitutions

  Ogawa T., Nakashima K., Oda N., Shimohigashi Y., Ohno M., Hattori S., Hattori M., Sakaki Y. & Kihara H.

  J Mol Recognit, 8, 40-46 1995

Lysine-49-Phospholipase A2 from Trimeresurus flavoviridis venom are membrane-acting enzymes

  Shimohigashi Y., Tani A., Matsumoto H., Nakashima K., Yamaguchi Y., Oda N., Takano Y., Kamiya H., Kishino J., Arita H. & Ohno M.

  J Biochem, 118, 1037-1044, 1995

1994年

Polymorphisms of Trimeresurus flavoviridis venom gland phospholipase A2 isozyme genes

  Nakashima K., Nobuhisa I., Ogawa T., Hattori M., Sakaki Y., Kihara H. & Ohno M

  Biosci Biotechnol Biochem, 58, 1510-1511, 1994.

Darwinian evolution of Trimeresurus flavoviridis venom gland phospholipase A2 isozymes

  Nakashima K., Ogawa T., Oda N., Shimohigashi Y., Hattori M., Sakaki Y., Kihara H. & Ohno M.

  Pure & Appl Chem, 66, 715-720, 1994

1993年

Purification, sequencing and characterization of single amino acid-substituted phospholipase A2 isozymes from Trimeresurus gramineus (green habu snake) venom

  Fukagawa T., Nose T., Shimohigashi Y., Ogawa T., Oda N., Nakashima K., Chang C.C. & Ohno M.

  Toxicon, 31, 957-967, 1993

Accelerated evolution of Trimeresurus flavoviridis venom gland phospholipase A2 isozymes

  Nakashima K., Ogawa T., Oda N., Hattori M., Sakaki Y., Kihara H. & Ohno M.

  Proc Natl Acad Sci USA, 90, 5964-5968, 1993

Chymotrypsin inhibitory conformation of dipeptides constructed by side chain-side chain hydrophobic interactions

  Sakamoto H., Shimohigashi Y., Maeda I., Nose T., Nakashima K., Nakamura I., Ogawa T., Kawano K. & Ohno M.

  Mol Recognit, 6, 95-100, 1993

1992年

Refolding of Trimeresurus flavoviridis phospholipase A2

  Tsuno S., Ogawa T., Nakashima K., Oda N., Lee S., Shimohigashi Y., Aoyagi H. & Ohno M.

  Bull Chem Soc Jpn, 65, 2655-2659 1992

Unusually high conservation of untranslated sequences in cDNAs for Trimeresurus flavoviridis phospholipase A2 isozymes

  Ogawa T., Oda N., Nakashima K., Sasaki H., Hattori M., Sakaki Y., Kihara H. & Ohno M.

  Proc Natl Acad Sci USA, 89, 8557-8561, 1992

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