ChangeLog
SraTailor is no longer managed. Thank you for using the service.
Update your SraTailor.
To update your SraTailor immediately, open the Terminal.app, and enter the following command.
curl http://devbio.med.kyushu-u.ac.jp/SraTailor/update.sh| sh
A dialog will ask you whether to update your SraTailor.
Click “Update Now” button; automatic update will be completed within a few seconds.
ChangeLog
SraTailor 1.0.7 (November 11, 2017) Latest!
– (Only for Mac) A small bug was fixed.
SraTailor 1.0.6 (November 06, 2017)
– Changed for dowloading SRAs due to the absence of ByExp directory.
SraTailor 1.0.5 (November 10, 2016)
– http URLs of NCBI have been changed to https.
SraTailor 1.0.4 (November 09, 2016)
– Broken link to SRA Toolkit has been fixed.
SraTailor 1.0.3 (October 05, 2016)
– Broken link to BedTools has been fixed.
SraTailor 1.0.2 (September 23, 2016)
– (Only for Mac) Executable on macOS Sierra.
SraTailor 1.0.1 (June 28, 2016)
– Broken links hve been fixed (Bowtie, SAMTools, IGV, UCSC tools, and BWA)
SraTailor 1.0.0 (December 06, 2015)
– Link to ChIP-Atlas is added.
– Fixed for installation of Xcode Command line tools.
SraTailor Beta 5.6.1 (October 24, 2015)
– MACS2 installataion on Python 2.7.10 or later.
– Peak models for MACS/MACS2 peak-calling.
SraTailor Beta 5.6 (July 9, 2015)
– BED features extending chromosome sizes are trimmed.
SraTailor Beta 5.5.1 (April 15, 2015)
– (Only for Ubuntu) Installation of yad (with -y) and md5 for twoBitToFa and bedGraphToBigWig.
SraTailor Beta 5.5.1 (January 19, 2015)
– (Only for Mac) Installation of MACS2 with the latest Python.
SraTailor Beta 5.5 (January 19, 2015)
– Downloading CLI tools becomes more robust when the server is unstable.
SraTailor Beta 5.4 (December 4, 2014)
– Downloading CLI tools becomes more robust when the server is unstable.
SraTailor Beta 5.3 (November 7, 2014)
– Path to input file, save directory or control BAM can include symbols.
SraTailor Beta 5.2 (October 30, 2014)
– Path to input file, save directory or control BAM can include spaces.
SraTailor Beta 5.1.1 (October 23, 2014)
– (Only for Mac) GUI is compatible with Mac OS 10.10 (Yosemite).
SraTailor Beta 5.1 (September 18, 2014)
– Share button on main menu.
SraTailor Beta 5.0 (September 11, 2014)
– SraTailor on Windows.
– SAM and BAM files are acceptable as input.
– Additional tools:
FastQC (Quality checker for Fastq)
Bowtie and BWA (Mapping tools)
MACS2 (Peak-caller)
SraTailor Beta 4.1 (June 26, 2014)
– The URL of MACS download has been changed.
– “Add Genome” action has been improved for unstable internet connection.
SraTailor Beta 4.0 (May 12, 2014)
– A mapping tool, Bowtie, has been replaced with Bowtie2.
– Subtle changes in “Make BigWig” window graphics.
SraTailor Beta 3.2 (May 9, 2014)
– A bug that bowtie is executed two times is fixed.
SraTailor Beta 3.1 (February 23, 2014)
– automatically checks SraTailor’s update.
SraTailor Beta 3 (February 20, 2014)
– More robust installation of CLI tools at the initial settings of SraTailor.
– Compatible with the latest Aspera Connect (Ver 3.3.3).
– Improvement of “Make BigWig” action with multi-threaded SAMtools (with -@ option).
SraTailor Beta 2 (January 16, 2014)
– Accession numbers beginning with SRX, DRX or ERX are acceptable as well as those with GSM. See the manual (§4. FAQs Q10 at pp18).
– Capable of sequential submissions. See the manual (§2.5. at pp13).
SraTailor Beta 1 (August 9, 2013)
– The first public release of the SraTailor.