{"id":24,"date":"2017-04-21T16:47:56","date_gmt":"2017-04-21T07:47:56","guid":{"rendered":"http:\/\/dn.wp.med.kyushu-u.ac.jp\/?page_id=24"},"modified":"2025-09-15T19:03:53","modified_gmt":"2025-09-15T10:03:53","slug":"resource","status":"publish","type":"page","link":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/resource\/","title":{"rendered":"\u30ea\u30bd\u30fc\u30b9"},"content":{"rendered":"<h2>Resources<\/h2>\n<p>\u5f53\u7814\u7a76\u5ba4\u306f\u30aa\u30fc\u30d7\u30f3\u30b5\u30a4\u30a8\u30f3\u30b9\u63a8\u9032\u306e\u305f\u3081\u3001\u5b9f\u9a13\u30d7\u30ed\u30c8\u30b3\u30eb\u3084\u30c7\u30fc\u30bf\u3001\u30ea\u30bd\u30fc\u30b9\u306e\u5171\u6709\u306b\u7a4d\u6975\u7684\u306b\u53d6\u308a\u7d44\u3093\u3067\u3044\u307e\u3059\u3002\u65b0\u305f\u306b\u958b\u767a\u3057\u305f\u5b9f\u9a13\u30d7\u30ed\u30c8\u30b3\u30eb\u306fbio-protocol\u8a8c\u3084SeeDB Resources\u306b\u516c\u958b\u3057\u3066\u3044\u307e\u3059\u3002\u9855\u5fae\u93e1\u753b\u50cf\u30c7\u30fc\u30bf\u306fSSBD\u306b\u30c7\u30dd\u30b8\u30c3\u30c8\u3057\u3066\u304a\u308a\u3001\u4e8c\u6b21\u4f7f\u7528\u304c\u53ef\u80fd\u3067\u3059\u3002Neurolucida\u306b\u3088\u3063\u3066\u53d6\u5f97\u3057\u305f\u795e\u7d4c\u5f62\u614b\u30c7\u30fc\u30bf\u306f\u5168\u3066NeuroMorph.org\u306b\u30c7\u30dd\u30b8\u30c3\u30c8\u3057\u3066\u3044\u307e\u3059\u3002\u65b0\u305f\u306b\u4f5c\u88fd\u3057\u305f\u30d7\u30e9\u30b9\u30df\u30c9\u306f\u5168\u3066Addgene\u306b\u30c7\u30dd\u30b8\u30c3\u30c8\u3057\u3066\u3044\u307e\u3059\u3002\u65b0\u305f\u306b\u66f8\u3044\u305f\u89e3\u6790\u30b3\u30fc\u30c9\u306fGitHub\u3067\u516c\u958b\u3057\u3066\u3044\u307e\u3059\u3002<\/p>\n<p>&nbsp;<\/p>\n<h3><b>SeeDB Resources<\/b><\/h3>\n<ul>\n<li><a href=\"https:\/\/sites.google.com\/site\/seedbresources\/\">SeeDB Resources<\/a>\u3000SeeDB, SeeDB2\u306a\u3069\u306e\u900f\u660e\u5316\u6cd5\u306e\u60c5\u5831\u30b5\u30a4\u30c8\u3002\u30d7\u30ed\u30c8\u30b3\u30eb\u3084TIPs\u3001\u52d5\u753b\u306a\u3069\u3002\u7d30\u304b\u3044\u60c5\u5831\u3092\u30a2\u30c3\u30d7\u30c7\u30fc\u30c8\u3057\u3066\u3044\u307e\u3059\u3002\u52d5\u753b\u306fSeeDB Resources\u304b\u3089\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u53ef\u80fd\u3067\u3059\uff08\u975e\u5546\u7528\u76ee\u7684\u306e\u5834\u5408\u306f\u3001\u30af\u30ec\u30b8\u30c3\u30c8\u8868\u8a18\u3092\u6761\u4ef6\u306b\u81ea\u7531\u306b\u4f7f\u7528\u53ef\uff09\u3002\u30dd\u30c3\u30d7\u30a2\u30a6\u30c8\u3057\u3001\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u30dc\u30bf\u30f3\u3067\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3067\u304d\u307e\u3059\u3002<\/li>\n<\/ul>\n<p>SeeDB YouTube:\u00a0<a href=\"http:\/\/youtu.be\/pg2YOc5OcBI\">[YouTube(1)]<\/a>\u00a0<a href=\"http:\/\/youtu.be\/1tQ_ZiOFc60\">[YouTube(2)]<\/a> <a href=\"http:\/\/youtu.be\/1HNfghdQjko\">[YouTube(3)]<\/a><\/p>\n<p>SeeDB2 YouTube:\u00a0 <a href=\"https:\/\/youtu.be\/TakrFLY7pU4\">[YouTube(1)]<\/a> <a href=\"https:\/\/youtu.be\/ENz4NM_4OUI\">[YouTube(2)]<\/a><a href=\"https:\/\/youtu.be\/eSoCLNAMy8U\">[YouTube(3)]<\/a><\/p>\n<p>SeeDB\u3001SeeDB2\u306f\u548c\u5149\u7d14\u85ac\u304b\u3089\u3082<a href=\"http:\/\/www.wako-chem.co.jp\/siyaku\/product\/life\/SeeDB\/index.htm\">\u5e02\u8ca9<\/a>\u3055\u308c\u3066\u3044\u307e\u3059\u3002<\/p>\n<p>&nbsp;<\/p>\n<h3><b>NeuroMorpho.org<\/b>\u00a0(\u795e\u7d4c\u7d30\u80de\u5f62\u614b\u30c7\u30fc\u30bf)<\/h3>\n<p>\u900f\u660e\u5316\u8133\u3092\u4f7f\u3063\u3066\u53d6\u5f97\u3057\u305f\u795e\u7d4c\u7d30\u80de\u306e\u5f62\u614b\u30c7\u30fc\u30bf\uff08Neurolucida\u306b\u3088\u308b\u518d\u69cb\u7bc9\u30c7\u30fc\u30bf\uff09\u306f\u3001\u8ad6\u6587\u767a\u8868\u5f8c\u3001NeuroMorpho.Org\u306b\u30c7\u30dd\u30b8\u30c3\u30c8\u3057\u3066\u3044\u307e\u3059\u3002Browse &gt; By Archive &gt; Imai\u3067\u95b2\u89a7\u3067\u304d\u307e\u3059\uff08<a href=\"http:\/\/neuromorpho.org\/bylab.jsp\">\u3053\u3061\u3089<\/a>\uff09\u3002(Ke et al., 2013; Ke et al., 2016; Murai et al., 2016; Sakaguchi et al., 2018; Aihara et al., 2020)<\/p>\n<p>&nbsp;<\/p>\n<h3><strong>SSBD<\/strong> (\u9855\u5fae\u93e1\u753b\u50cf\u751f\u30c7\u30fc\u30bf)<\/h3>\n<p>\u5f53\u7814\u7a76\u5ba4\u304b\u3089\u767a\u8868\u3057\u305f\u8ad6\u6587\u306e\u753b\u50cf\u30c7\u30fc\u30bf\uff08\u751f\u30c7\u30fc\u30bf\uff09\u306fSystems Science of Biological Dynamics (SSBD) \u30c7\u30fc\u30bf\u30d9\u30fc\u30b9\u306b\u30c7\u30dd\u30b8\u30c3\u30c8\u3057\u3066\u3044\u307e\u3059\u3002\u81ea\u7531\u306b\u95b2\u89a7\u3001\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3001\u518d\u4f7f\u7528\u53ef\u80fd\u3067\u3059\u3002<\/p>\n<p><a href=\"http:\/\/ssbd.qbic.riken.jp\/image\/webclient\/?show=project-55\">Ke et al., <em>Nature Neuroscience<\/em> (2013)<\/a><\/p>\n<p><a href=\"http:\/\/ssbd.qbic.riken.jp\/image\/webclient\/?show=project-59\">Ke et al.,\u00a0 <em>Cell Reports<\/em> (2016)<\/a><\/p>\n<p><a href=\"http:\/\/ssbd.qbic.riken.jp\/image\/webclient\/?show=project-305\">Iwata et al., <em>Neuron<\/em> (2017)<\/a><\/p>\n<p><a href=\"http:\/\/ssbd.qbic.riken.jp\/image\/webclient\/?show=project-401\">Sakaguchi et al., <em>eLife<\/em> (2018)<\/a><\/p>\n<p><a href=\"http:\/\/ssbd.qbic.riken.jp\/set\/20200528\/\">Inagaki et al., <em>Cell Reports\u00a0<\/em>(2020)<\/a><\/p>\n<p><a href=\"https:\/\/doi.org\/10.24631\/ssbd.repos.2021.04.001\">Aihara et al., <em>Cell Reports<\/em> (2021)<\/a><\/p>\n<p><a href=\"https:\/\/ssbd.riken.jp\/repository\/289\/\">Fujimoto et al., <em>Dev Cell<\/em> (2023)<\/a><\/p>\n<p><a href=\"https:\/\/doi.org\/10.24631\/ssbd.repos.2023.10.326\">Niiyama et al., <em>eNeuro<\/em> (2023)<\/a><\/p>\n<p><a href=\"https:\/\/doi.org\/10.24631\/ssbd.repos.2024.05.346\">Leiwe et al., <em>Nat Commun<\/em> (2024)<\/a><\/p>\n<h3><strong>Addgene<\/strong>\u00a0(\u30d7\u30e9\u30b9\u30df\u30c9)<\/h3>\n<p>\u5f53\u7814\u7a76\u5ba4\u304b\u3089\u767a\u8868\u3057\u305f\u8ad6\u6587\u306b\u542b\u307e\u308c\u308b\u65b0\u3057\u3044\u30d7\u30e9\u30b9\u30df\u30c9\u306fAddgene\u306b\u30c7\u30dd\u30b8\u30c3\u30c8\u3057\u3066\u3044\u307e\u3059\u3002<\/p>\n<div style=\"width: 280px;border: thin solid #888;padding: 10px;text-align: center\"><a style=\"text-decoration: none;color: #585858;font-size: 16px;font-family: Arial,Helvetica,sans-serif\" href=\"https:\/\/www.addgene.org\/Takeshi_Imai\/\" target=\"_blank\" rel=\"noopener noreferrer\"><b>Takeshi Imai Lab<\/b><br \/>\nFind and request materials through<br \/>\n<img loading=\"lazy\" decoding=\"async\" style=\"margin-top: 16px\" src=\"https:\/\/media.addgene.org\/cms\/filer_public\/ea\/82\/ea826144-fce2-4c13-99e9-940af7e2853b\/logo-addgene.png\" alt=\"Addgene\" width=\"250\" height=\"48\" \/><\/a><\/div>\n<p><a href=\"https:\/\/www.addgene.org\/Takeshi_Imai\/\">Takeshi Imai Lab Plasmids<\/a><\/p>\n<h3><strong>GEO<\/strong> (\u907a\u4f1d\u5b50\u767a\u73fe\u30c7\u30fc\u30bf)<\/h3>\n<p><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/geo\/query\/acc.cgi?acc=GSE171875\">Aihara et al., <em>Cell Reports<\/em> (2021)<\/a><\/p>\n<h3><strong>GitHub<\/strong>\u00a0(\u89e3\u6790\u30b3\u30fc\u30c9)<\/h3>\n<p>\u5f53\u7814\u7a76\u5ba4\u304b\u3089\u767a\u8868\u3057\u305f\u8ad6\u6587\u306b\u542b\u307e\u308c\u308b\u30b3\u30fc\u30c9\u306f\u3053\u3061\u3089\uff1a<\/p>\n<p><a href=\"https:\/\/github.com\/TakeshiImaiLab\">GitHub repositories &#8211; Takeshi Imai Lab<\/a><\/p>\n<p><a href=\"https:\/\/github.com\/elifesciences-publications\/TetbowCodes\">Tetbow codes<\/a>\u00a0from Sakaguchi et al.,\u00a0<em>eLife<\/em>\u00a0(2018)<\/p>\n<p>&nbsp;<\/p>\n<h2>Protocols<\/h2>\n<h3><b>SeeDB, SeeDB2, Tetbow, &#8230;<\/b><\/h3>\n<ul>\n<li><a href=\"https:\/\/sites.google.com\/site\/seedbresources\/\">SeeDB Resources<\/a>\u3000SeeDB, SeeDB2\u306a\u3069\u306e\u900f\u660e\u5316\u6cd5\u306e\u60c5\u5831\u30b5\u30a4\u30c8\u3002\u30d7\u30ed\u30c8\u30b3\u30eb\u3084TIPs\u3001\u52d5\u753b\u306a\u3069\u3002<\/li>\n<li><a href=\"http:\/\/bio-protocol.org\/e1042\">SeeDB protocol in\u00a0<em>bio-protocol<\/em><\/a><\/li>\n<li><a href=\"https:\/\/bio-protocol.org\/e3046\">SeeDB2 protocol in <em>bio-protocol<\/em><\/a><\/li>\n<li><a href=\"https:\/\/media.addgene.org\/cms\/filer_public\/d2\/98\/d298781e-9f55-469d-b092-caa15556513f\/how_to_use_tetbow.pdf\">Tetbow protocol in Addgene<\/a><\/li>\n<\/ul>\n<p>\u65e5\u672c\u8a9e\u306e\u89e3\u8aac\u3068\u30d7\u30ed\u30c8\u30b3\u30eb\uff08\u7c21\u6613\u7248\uff09\u306f<a href=\"SeeDB-jp.pdf\">\u3053\u3061\u3089<\/a>\u3002<\/p>\n<h3><b>Single-cell microarray<\/b> (Imai et al., 2009)<\/h3>\n<ul>\n<li><a href=\"single-cell-microarray.pdf\"> overview <\/a><\/li>\n<li><a href=\"TdTd0.txt\"> Single cell preparation <\/a><\/li>\n<li><a href=\"TdTd1.txt\"> T7 promoter-liked cDNA synthesis from single cells <\/a><\/li>\n<li><a href=\"TdTd2.txt\"> Cy Dye Labeling (for Agilent) <\/a><\/li>\n<li><a href=\"TdTd3.txt\"> Hybridization (Agilent 4x44k) <\/a><\/li>\n<li>*<a>&#8220;&gt;Quartz-Seq<\/a> is an updated version of single cell transcriptome analysis based on our original protocol.<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<h3><b>Single-cell cDNA library <\/b> (Imai et al., 2006)<\/h3>\n<p><a href=\"single_cell_rtpcr.doc\"> Single cell cDNA library (\u7c21\u6613\u6cd5) <\/a><\/p>\n<p>&nbsp;<\/p>\n<h3><b>Two-color <i>in situ<\/i> hybridization<\/b> (Imai et al., 2006; Imai et al., 2009)<\/h3>\n<ul>\n<li><a href=\"ISH1.txt\"> Two-color <i>in situ<\/i> hybridization (TSA\/TSA) <\/a><\/li>\n<li><a href=\"ISH2.txt\"> Two-color <i>in situ<\/i> hybridization (TSA\/FastRed) <\/a><\/li>\n<li><a href=\"ISH3.txt\"> IHC\/ISH\u5171\u67d3\u8272<\/a><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<h3><b>\u305d\u306e\u4ed6<\/b><\/h3>\n<ul>\n<li><a href=\"bac.txt\"> BAC manipulation <\/a><\/li>\n<li><a href=\"ear.txt\"> \u30de\u30a6\u30b9\u30b8\u30a7\u30ce\u30bf\u30a4\u30d4\u30f3\u30b0\u7c21\u6613\u6cd5 <\/a><\/li>\n<li><a href=\"ar.txt\"> \u6297\u539f\u4e0d\u6d3b\u5316(\u6297\u4f53\u67d3\u8272\u7528) <\/a><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<h2>\u7279\u8a31<\/h2>\n<ul>\n<li>\u51fa\u9858\u756a\u53f7\uff1a 2012-141488\u3000PCT\/JP2013\/067085 (\u7279\u8a31\u756a\u53f7 5967528)\u3000\u767a\u660e\u306e\u540d\u79f0\uff1a\u751f\u7269\u6750\u6599\u3092\u900f\u660e\u5316\u3059\u308b\u65b9\u6cd5\u304a\u3088\u3073\u751f\u7269\u6750\u6599\u7528\u900f\u660e\u5316\u51e6\u7406\u30ad\u30c3\u30c8\u3000<a href=\"https:\/\/patents.google.com\/patent\/WO2013191274A1\">Google Patents<\/a><\/li>\n<li>\u51fa\u9858\u756a\u53f7\uff1a 2015-55325\u3000PCT\/JP2016\/055229 (\u7279\u8a31\u756a\u53f7 6781421)\u3000\u767a\u660e\u306e\u540d\u79f0\uff1a\u751f\u7269\u6750\u6599\u306e\u89b3\u5bdf\u65b9\u6cd5\u304a\u3088\u3073\u900f\u660e\u5316\u65b9\u6cd5\u3000<a href=\"https:\/\/patents.google.com\/patent\/WO2016147812A1\">Google Patents<\/a><\/li>\n<li>\u51fa\u9858\u756a\u53f7\uff1a 2021-122029\u3000\u7279\u958b2023-17644\u3000\u767a\u660e\u306e\u540d\u79f0\uff1a \u89e3\u6790\u65b9\u6cd5\u3001\u89e3\u6790\u88c5\u7f6e\u304a\u3088\u3073\u30d7\u30ed\u30b0\u30e9\u30e0<\/li>\n<li>\u51fa\u9858\u756a\u53f7\uff1a2024-39646\u3000PCT\/JP2025\/080045\u3000\u767a\u660e\u306e\u540d\u79f0\uff1a\u751f\u4f53\u8a66\u6599\u306e\u900f\u660e\u5316\u8a66\u85ac<\/li>\n<\/ul>\n<h2>Mice<\/h2>\n<ul>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02931\"> I7-IRES-gapCFP <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02932\"> I7-IRES-Cre <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02933\"> I7(RDY)-IRES-gapYFP <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02934\"> caGs-IRES-gapYFP <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02935\"> I7(RDY)-IRES-caGs-IRES-gapCFP <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02936\"> I7-IRES-dnPKA-IRES-gapYFP <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02937\"> MOR23(del)-Venus <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02938\"> MOR23(del)-Cre-gapCFP line 17 <\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02939\"> MOR23(del)-Cre-gapCFP line 6 (class II-Cre) <\/a><\/li>\n<li><a href=\"http:\/\/www.cdb.riken.jp\/arg\/TG_mutant_file\/CDB0449T.htmlt\"> I7(RDY)-IRES-Nrp1-IRES-gapCFP<\/a> \u3082\u3057\u304f\u306f <a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC05279\">\u3053\u3061\u3089<\/a><\/li>\n<li><a href=\"http:\/\/www2.brc.riken.jp\/lab\/animal\/detail.php?brc_no=RBRC02940\"> <i>Gng8<\/i> KO<\/a><\/li>\n<li>OMP-tTA BAC Tg\u3000\uff08\u6e96\u5099\u4e2d\uff09<\/li>\n<li>R26-TRE-GCaMP3 BAC Tg\u3000\uff08\u6e96\u5099\u4e2d\uff09<\/li>\n<\/ul>\n<p>\u203b\u4e0d\u660e\u306a\u70b9\u306b\u3064\u3044\u3066\u306f\u304a\u6c17\u8efd\u306b\u30e1\u30fc\u30eb\u306b\u3066\u304a\u554f\u3044\u5408\u308f\u305b\u304f\u3060\u3055\u3044\u3002<br \/>\n\u5171\u540c\u7814\u7a76\u3082\u6b53\u8fce\u3044\u305f\u3057\u307e\u3059\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Resources \u5f53\u7814\u7a76\u5ba4\u306f\u30aa\u30fc\u30d7\u30f3\u30b5\u30a4\u30a8\u30f3\u30b9\u63a8\u9032\u306e\u305f\u3081\u3001\u5b9f\u9a13\u30d7\u30ed\u30c8\u30b3\u30eb\u3084\u30c7\u30fc\u30bf\u3001\u30ea\u30bd\u30fc\u30b9\u306e\u5171\u6709\u306b\u7a4d\u6975\u7684\u306b\u53d6\u308a\u7d44\u3093\u3067\u3044\u307e\u3059\u3002\u65b0\u305f\u306b\u958b\u767a\u3057\u305f\u5b9f\u9a13\u30d7\u30ed\u30c8\u30b3\u30eb\u306fbio-protocol\u8a8c\u3084SeeDB Resources\u306b\u516c\u958b&hellip; <\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-templates\/resource-template.php","meta":{"footnotes":""},"class_list":["post-24","page","type-page","status-publish","hentry","clearfix"],"_links":{"self":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/pages\/24","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/comments?post=24"}],"version-history":[{"count":51,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/pages\/24\/revisions"}],"predecessor-version":[{"id":2707,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/pages\/24\/revisions\/2707"}],"wp:attachment":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-json\/wp\/v2\/media?parent=24"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}