{"id":482,"date":"2024-07-05T11:07:26","date_gmt":"2024-07-05T02:07:26","guid":{"rendered":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/?p=482"},"modified":"2024-07-05T11:09:29","modified_gmt":"2024-07-05T02:09:29","slug":"automated-neuronal-reconstruction-with-super-multicolour-tetbow-labelling-and-threshold-based-clustering-of-colour-hues","status":"publish","type":"post","link":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/2024\/07\/05\/automated-neuronal-reconstruction-with-super-multicolour-tetbow-labelling-and-threshold-based-clustering-of-colour-hues\/","title":{"rendered":"Automated neuronal reconstruction with super-multicolour Tetbow labelling and threshold-based clustering of colour hues"},"content":{"rendered":"<h3>Automated neuronal reconstruction with super-multicolour Tetbow labelling and threshold-based clustering of colour hues<\/h3>\n<p>Leiwe MN, Fujimoto S, Baba T, Moriyasu D, Saha B, Sakaguchi R, Inagaki S, Imai T.<\/p>\n<p><strong><em>Nature Communications <\/em><\/strong>15: 5279 (2024)<strong><em><br \/>\n<\/em><\/strong><a href=\"https:\/\/doi.org\/10.1038\/s41467-024-49455-y\">https:\/\/doi.org\/10.1038\/s41467-024-49455-y<\/a><strong><em><br \/>\nbioRxiv<\/em><\/strong> 2022.10.20.512984<br \/>\n<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2022.10.20.512984v1\">https:\/\/www.biorxiv.org\/content\/10.1101\/2022.10.20.512984v1<\/a><\/p>\n<p><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/38918382\/\" target=\"_blank\" rel=\"noopener noreferrer\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-123 size-full\" src=\"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-content\/uploads\/sites\/16\/2017\/04\/pubmed_ico.jpg\" alt=\"\" width=\"50\" height=\"20\" \/><\/a> <a href=\"https:\/\/www.nature.com\/articles\/s41467-024-49455-y.pdf\" target=\"_blank\" rel=\"noopener noreferrer\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-138 size-full\" src=\"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn\/wp-content\/uploads\/sites\/16\/2017\/04\/pdf.jpg\" alt=\"\" width=\"50\" height=\"20\" \/><\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-148\" src=\"https:\/\/www.lab.med.kyushu-u.ac.jp\/wp-content\/uploads\/sites\/16\/2017\/04\/link.jpg\" alt=\"\" width=\"50\" height=\"20\" \/><\/p>\n<p><a href=\"https:\/\/www.kyushu-u.ac.jp\/ja\/researches\/view\/1100\">[\u30d7\u30ec\u30b9\u30ea\u30ea\u30fc\u30b9(\u4e5d\u5dde\u5927\u5b66)]<\/a>\u00a0<a href=\"https:\/\/www.kyushu-u.ac.jp\/en\/researches\/view\/291\">[press release (Kyushu Univ)]<\/a><br \/>\n[Original microscopy images (<a href=\"https:\/\/ssbd.riken.jp\/repository\/346\/\" target=\"_blank\" rel=\"noopener\">SSBD Repository<\/a>)], [Post-hoc chromatic aberration correction codes (<a href=\"https:\/\/github.com\/mleiwe\/ChromaticAberrationCorrection\">GitHub<\/a>)],\u00a0[Linearity correction program for Leica HyD (<a href=\"https:\/\/github.com\/mleiwe\/HyD_NonLinearCorrection\">GitHub<\/a>)],\u00a0[ImageJ plugin for Linear Unmixing (<a href=\"https:\/\/github.com\/daichimori\/Linear-unmixing-Qdye\">GitHub<\/a>)],\u00a0[dCrawler (MATLAB and Python) (<a href=\"https:\/\/github.com\/mleiwe\/dCrawler\">GitHub<\/a>)],\u00a0[QDyeFinder (<a href=\"https:\/\/github.com\/mleiwe\/QDyeFinder\">GitHub<\/a>)],\u00a0[SWC exporter for Imaris Filament Tracer (<a href=\"https:\/\/github.com\/Elsword016\/Swc-plugins-for-Imaris-10\">GitHub<\/a>)]<\/p>\n<p>\u30de\u30a4\u30ca\u30d3\u30cb\u30e5\u30fc\u30b9TECH+\u3001EurekAlert!\u7b49\u306b\u63b2\u8f09\u3055\u308c\u307e\u3057\u305f\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Automated neuronal reconstruction with super-multicolour Tetbow labelling and threshold-based clustering of co&hellip; <\/p>\n","protected":false},"author":22,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[4],"tags":[],"class_list":["post-482","post","type-post","status-publish","format-standard","hentry","category-original","clearfix"],"_links":{"self":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/posts\/482","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/users\/22"}],"replies":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/comments?post=482"}],"version-history":[{"count":2,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/posts\/482\/revisions"}],"predecessor-version":[{"id":484,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/posts\/482\/revisions\/484"}],"wp:attachment":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/media?parent=482"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/categories?post=482"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/dn-en\/wp-json\/wp\/v2\/tags?post=482"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}