{"id":161,"date":"2013-10-18T13:37:31","date_gmt":"2013-10-18T04:37:31","guid":{"rendered":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/?page_id=161"},"modified":"2026-04-20T12:15:49","modified_gmt":"2026-04-20T03:15:49","slug":"links_sratailor","status":"publish","type":"page","link":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/sra_tailor\/links_sratailor\/","title":{"rendered":"Links"},"content":{"rendered":"<h2 align=\"left\">SraTailor is no longer maintained or distributed. This page is kept for reference purposes only. Thank you for your interest.<\/h2>\n<ul class=\"links_SraTailor\">\n<li><a href=\"https:\/\/code.google.com\/p\/bedtools\/\" target=\"_blank\" rel=\"noopener noreferrer\">BEDTools (v2.17.0)<\/a><\/li>\n<li><a href=\"http:\/\/bowtie-bio.sourceforge.net\/bowtie2\/index.shtml\" target=\"_blank\" rel=\"noopener noreferrer\">Bowtie2 (v2.2.2)<\/a><\/li>\n<li><a href=\"http:\/\/bowtie-bio.sourceforge.net\/index.shtml\" target=\"_blank\" rel=\"noopener noreferrer\">Bowtie (v1.0.0)<\/a><\/li>\n<li><a href=\"http:\/\/bio-bwa.sourceforge.net\" target=\"_blank\" rel=\"noopener noreferrer\">BWA (v0.7.10)<\/a><\/li>\n<li><a href=\"http:\/\/www.bioinformatics.babraham.ac.uk\/projects\/fastqc\/\" target=\"_blank\" rel=\"noopener noreferrer\">FastQC (V0.11.2)<\/a><\/li>\n<li><a href=\"http:\/\/www.broadinstitute.org\/igv\/\" target=\"_blank\" rel=\"noopener noreferrer\">IGV (v2.3.2)<\/a><\/li>\n<li><a href=\"http:\/\/liulab.dfci.harvard.edu\/MACS\/\" target=\"_blank\" rel=\"noopener noreferrer\">MACS (v1.4.2)<\/a><\/li>\n<li><a href=\"https:\/\/github.com\/taoliu\/MACS\/\" target=\"_blank\" rel=\"noopener noreferrer\">MACS2 (v2.1.0)<\/a><\/li>\n<li><a href=\"http:\/\/samtools.sourceforge.net\" target=\"_blank\" rel=\"noopener noreferrer\">SAMtools (v0.1.19)<\/a><\/li>\n<li><a href=\"http:\/\/trace.ncbi.nlm.nih.gov\/Traces\/sra\/sra.cgi?view=std#s-2\" target=\"_blank\" rel=\"noopener noreferrer\">SRA Toolkit (v2.3.2)<\/a><\/li>\n<li><a href=\"http:\/\/hgdownload.soe.ucsc.edu\/downloads.html\" target=\"_blank\" rel=\"noopener noreferrer\">UCSC Utilities<\/a><\/li>\n<li><a href=\"http:\/\/hgdownload.cse.ucsc.edu\/\" target=\"_blank\" rel=\"noopener noreferrer\">UCSC Sequence and Annotation Downloads<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>SraTailor is no longer maintained or distributed. This page is kept for reference purposes only. Thank you for your interest. BEDTools (v2.17.0) Bowtie2 (v2.2.2) Bowtie (v1.0.0) BWA (v0.7.10) FastQC (V0.11.2) IGV (v2.3.2) MACS (v1.4.2) MACS2 (v2.1.0) SAMtools (v0.1.19) SRA Toolkit (v2.3.2) UCSC Utilities UCSC Sequence and Annotation Downloads<\/p>\n","protected":false},"author":20,"featured_media":0,"parent":147,"menu_order":13,"comment_status":"open","ping_status":"closed","template":"page_sra_tailor.php","meta":{"footnotes":""},"class_list":["post-161","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/161","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/users\/20"}],"replies":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/comments?post=161"}],"version-history":[{"count":12,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/161\/revisions"}],"predecessor-version":[{"id":37991,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/161\/revisions\/37991"}],"up":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/147"}],"wp:attachment":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/media?parent=161"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}