{"id":161,"date":"2013-10-18T13:37:31","date_gmt":"2013-10-18T04:37:31","guid":{"rendered":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/?page_id=161"},"modified":"2020-10-08T16:38:27","modified_gmt":"2020-10-08T07:38:27","slug":"links_sratailor","status":"publish","type":"page","link":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/sra_tailor\/links_sratailor\/","title":{"rendered":"Links"},"content":{"rendered":"<h2 align=\"left\">SraTailor is no longer managed. Thank you for using the service.<\/h2>\n<ul class=\"links_SraTailor\">\n<li><a href=\"https:\/\/code.google.com\/p\/bedtools\/\" target=\"_blank\" rel=\"noopener noreferrer\">BEDTools (v2.17.0)<\/a><\/li>\n<li><a href=\"http:\/\/bowtie-bio.sourceforge.net\/bowtie2\/index.shtml\" target=\"_blank\" rel=\"noopener noreferrer\">Bowtie2 (v2.2.2)<\/a><\/li>\n<li><a href=\"http:\/\/bowtie-bio.sourceforge.net\/index.shtml\" target=\"_blank\" rel=\"noopener noreferrer\">Bowtie (v1.0.0)<\/a><\/li>\n<li><a href=\"http:\/\/bio-bwa.sourceforge.net\" target=\"_blank\" rel=\"noopener noreferrer\">BWA (v0.7.10)<\/a><\/li>\n<li><a href=\"http:\/\/www.bioinformatics.babraham.ac.uk\/projects\/fastqc\/\" target=\"_blank\" rel=\"noopener noreferrer\">FastQC (V0.11.2)<\/a><\/li>\n<li><a href=\"http:\/\/www.broadinstitute.org\/igv\/\" target=\"_blank\" rel=\"noopener noreferrer\">IGV (v2.3.2)<\/a><\/li>\n<li><a href=\"http:\/\/liulab.dfci.harvard.edu\/MACS\/\" target=\"_blank\" rel=\"noopener noreferrer\">MACS (v1.4.2)<\/a><\/li>\n<li><a href=\"https:\/\/github.com\/taoliu\/MACS\/\" target=\"_blank\" rel=\"noopener noreferrer\">MACS2 (v2.1.0)<\/a><\/li>\n<li><a href=\"http:\/\/samtools.sourceforge.net\" target=\"_blank\" rel=\"noopener noreferrer\">SAMtools (v0.1.19)<\/a><\/li>\n<li><a href=\"http:\/\/trace.ncbi.nlm.nih.gov\/Traces\/sra\/sra.cgi?view=std#s-2\" target=\"_blank\" rel=\"noopener noreferrer\">SRA Toolkit (v2.3.2)<\/a><\/li>\n<li><a href=\"http:\/\/hgdownload.soe.ucsc.edu\/downloads.html\" target=\"_blank\" rel=\"noopener noreferrer\">UCSC Utilities<\/a><\/li>\n<li><a href=\"http:\/\/hgdownload.cse.ucsc.edu\/\" target=\"_blank\" rel=\"noopener noreferrer\">UCSC Sequence and Annotation Downloads<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>SraTailor is no longer managed. Thank you for using the service. BEDTools (v2.17.0) Bowtie2 (v2.2.2) Bowtie (v1.0.0) BWA (v0.7.10) FastQC (V0.11.2) IGV (v2.3.2) MACS (v1.4.2) MACS2 (v2.1.0) SAMtools (v0.1.19) SRA Toolkit (v2.3.2) UCSC Utilities UCSC Sequence and Annotation Downloads<\/p>\n","protected":false},"author":20,"featured_media":0,"parent":147,"menu_order":13,"comment_status":"open","ping_status":"closed","template":"page_sra_tailor.php","meta":{"footnotes":""},"class_list":["post-161","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/161","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/users\/20"}],"replies":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/comments?post=161"}],"version-history":[{"count":11,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/161\/revisions"}],"predecessor-version":[{"id":37972,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/161\/revisions\/37972"}],"up":[{"embeddable":true,"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/pages\/147"}],"wp:attachment":[{"href":"https:\/\/www.lab.med.kyushu-u.ac.jp\/devbio\/wp-json\/wp\/v2\/media?parent=161"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}